Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gnl3lG protein nucleolar 3 like. (561 aa)    
Predicted Functional Partners:
gnl2
G protein nucleolar 2.
  
0.997
pes1
Pescadillo ribosomal biogenesis factor 1.
   
 0.994
cep152
Centrosomal protein 152.
   
 0.993
ebna1bp2
EBNA1 binding protein 2.
   
 0.992
wdr12
WD repeat domain 12.
   
 0.990
rpf2
Ribosome production factor 2 homolog.
   
 
 0.987
gtpbp4
GTP binding protein 4.
   
 
 0.987
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.986
ddx18
DEAD-box helicase 18.
  
 0.985
gnl3
G protein nucleolar 3.
  
 
0.984
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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