Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001974annotation not available (418 aa)    
Predicted Functional Partners:
tnfaip3
TNF alpha induced protein 3.
   
 
 0.775
traf3ip2
TRAF3 interacting protein 2.
    
 0.648
ENSCGOP00000056776
annotation not available
    
 0.648
LOC115018756
Interferon regulatory factor 1-like.
   
 
 0.643
slc29a4
Solute carrier family 29 member 4.
    
 
 0.641
nfkbia
NFKB inhibitor alpha.
   
 
 0.638
LOC115003431
NF-kappa-B inhibitor alpha-like.
   
 
 0.638
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
    
 0.616
LOC115010407
Transcription factor NF-E2 45 kDa subunit-like.
   
 0.578
il1b
Interleukin 1 beta.
   
 0.563
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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