Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001990Coiled-coil domain containing 28A. (809 aa)    
Predicted Functional Partners:
LOC115008921
Rac GTPase-activating protein 1-like.
   
 
 0.892
racgap1
Rac GTPase activating protein 1.
   
 
 0.892
kif11
Kinesin family member 11.
   
  
 0.770
ncapg
non-SMC condensin I complex subunit G.
   
  
 0.765
ttk
TTK protein kinase.
   
  
 0.748
ENSCGOP00000001175
annotation not available
   
 
 0.743
aspm
Abnormal spindle microtubule assembly.
   
 
 0.743
fbxo48
F-box protein 48.
      
 0.727
fbxo47
F-box protein 47.
      
 0.695
LOC115013578
Kinetochore protein NDC80 homolog.
   
  
 0.688
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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