Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb49Zinc finger and BTB domain containing 49. (793 aa)    
Predicted Functional Partners:
nup58
Nucleoporin 58.
    
 
 0.688
gopc
Golgi associated PDZ and coiled-coil motif containing.
    
   0.666
LOC115014788
Uncharacterized LOC115014788.
    
 
 0.639
LOC115024047
Coiled-coil domain-containing protein 149-like.
      
 0.629
LOC115015877
Coiled-coil domain-containing protein 149-like.
      
 0.629
pacrg
Parkin coregulated.
    
 
 0.623
msc
Musculin.
    
 
 0.613
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.598
NSG1
Neuronal vesicle trafficking associated 1.
      
 0.593
tmem128
Transmembrane protein 128.
      
 0.577
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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