Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000002012annotation not available (316 aa)    
Predicted Functional Partners:
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.569
wdr90
WD repeat domain 90.
    
  0.515
gak
Cyclin G associated kinase.
   
 0.498
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
  0.467
katnal2
Katanin catalytic subunit A1 like 2.
   
  0.432
traf7
TNF receptor associated factor 7.
    
  0.413
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.410
bard1
BRCA1 associated RING domain 1.
    
  0.407
tonsl
Tonsoku like, DNA repair protein.
    
  0.405
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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