Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000003003annotation not available (353 aa)    
Predicted Functional Partners:
tsnax
Translin associated factor X.
    
 
 0.836
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
 0.803
ENSCGOP00000013968
annotation not available
   
 
 0.777
ssrp1
Structure specific recognition protein 1.
    
 
 0.752
rtf1
RTF1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.748
ENSCGOP00000042445
annotation not available
   
 0.746
rsph14
Radial spoke head 14 homolog.
   
  
 0.729
adad1
Adenosine deaminase domain containing 1.
      
 0.728
zswim2
Zinc finger SWIM-type containing 2.
    
 
 0.715
fancm
FA complementation group M.
   
 0.708
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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