STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
magMyelin associated glycoprotein. (589 aa)    
Predicted Functional Partners:
ptprc
Protein tyrosine phosphatase receptor type C.
   
 0.656
ptpn6
Protein tyrosine phosphatase non-receptor type 6.
   
 0.610
LOC115010746
Tyrosine-protein phosphatase non-receptor type 11-like.
   
 0.610
ptpn11
Protein tyrosine phosphatase non-receptor type 11.
   
 0.610
hgfac
HGF activator.
    
  0.603
habp2
Hyaluronan binding protein 2.
    
  0.603
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.602
LOC115020342
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
  0.602
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.602
LOC115016353
CD276 antigen-like.
   
 0.586
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.