STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115020917Friend leukemia integration 1 transcription factor-like. (485 aa)    
Predicted Functional Partners:
LOC115018094
Runt-related transcription factor 1-like.
   
 0.732
runx2
RUNX family transcription factor 2.
   
 0.732
LOC115027421
Runt-related transcription factor 3-like.
   
 0.732
spi1
Spi-1 proto-oncogene.
   
 0.711
SRF
Serum response factor.
    
 0.664
LOC115005577
Serum response factor-like.
    
 0.664
ENSCGOP00000029441
annotation not available
    
 0.661
LOC115023045
T-cell acute lymphocytic leukemia protein 1.
    
 0.661
cbfb
Core-binding factor subunit beta.
    
  0.652
LOC115008926
GATA-binding factor 2-like.
   
 0.570
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.