Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115006310Leucine-rich repeat-containing protein 4C-like. (631 aa)    
Predicted Functional Partners:
ENSCGOP00000021639
annotation not available
    
 0.964
LOC115021958
netrin-G1-like.
    
 0.964
LOC115010041
Leucine-rich repeat-containing protein 4C-like.
  
  
 
0.901
LOC115025633
netrin-G1-like.
    
 
 0.656
fam151b
Family with sequence similarity 151 member B.
    
 
 0.609
erbb3
Erb-b2 receptor tyrosine kinase 3.
   
 0.603
LOC115010612
Receptor tyrosine-protein kinase erbB-3-like.
   
 0.603
LOC115024277
Receptor tyrosine-protein kinase erbB-2-like.
   
 0.603
LOC115017944
Receptor tyrosine-protein kinase erbB-4-like.
   
 0.603
LOC115026094
Receptor tyrosine-protein kinase erbB-4-like.
   
 0.603
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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