Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115019014Endosialin-like. (710 aa)    
Predicted Functional Partners:
ppic
Peptidylprolyl isomerase C.
   
 0.562
mysm1
Myb like, SWIRM and MPN domains 1.
    
 0.557
oxa1l
OXA1L mitochondrial inner membrane protein.
      
 0.552
ubac1
UBA domain containing 1.
      
 0.552
LOC115013016
SPARC-like protein 1.
   
 0.550
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.533
LOC115021281
T-cell surface glycoprotein CD4-like.
    
 0.503
LOC115018191
Serpin H1-like.
   
 0.501
LOC115019368
Serpin H1-like.
   
 0.501
ENSCGOP00000032063
annotation not available
   
 0.492
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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