Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115020853SH3 domain-binding protein 5-like. (432 aa)    
Predicted Functional Partners:
sncaip
Synuclein alpha interacting protein.
    
 
 0.715
telo2
Telomere maintenance 2.
      
 0.686
pla2g6
Phospholipase A2 group VI.
   
  
 0.650
RNF146
E3 ubiquitin-protein ligase rnf146-like.
    
 
 0.637
LOC115020950
Ras-related protein Rab-11A-like.
    
 
 0.544
ENSCGOP00000013743
annotation not available
    
 
 0.544
rab11a
RAB11A, member RAS oncogene family.
    
 
 0.544
LOC115006801
Ras-related protein Rab-11B-like.
    
 
 0.544
LOC115022178
Ras-related protein Rab-11B.
    
 
 0.544
CDH18
Cadherin-18-like.
      
 0.521
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (16%) [HD]