Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
timm10Translocase of inner mitochondrial membrane 10. (88 aa)    
Predicted Functional Partners:
timm10b
Translocase of inner mitochondrial membrane 10B.
   
 0.999
timm13
Translocase of inner mitochondrial membrane 13.
   
 0.999
timm8a
Translocase of inner mitochondrial membrane 8A.
   
 0.998
TIMM22
Translocase of inner mitochondrial membrane 22.
   
 0.985
timm8b
Translocase of inner mitochondrial membrane 8 homolog B.
   
 0.984
LOC115008758
Mitochondrial intermembrane space import and assembly protein 40-like.
   
 0.979
LOC115022031
Cactin-like.
   
 0.964
LOC115014539
Uncharacterized LOC115014539.
   
 0.961
LOC115014803
Uncharacterized LOC115014803.
   
 0.961
LOC115014953
Signal-regulatory protein beta-2-like.
   
 0.961
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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