STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115008795GTP-binding protein Rheb-like. (184 aa)    
Predicted Functional Partners:
tsc2
TSC complex subunit 2.
    
 0.988
mtor
Mechanistic target of rapamycin kinase.
    
 0.978
ENSCGOP00000024258
annotation not available
   
 0.961
tsc1
TSC complex subunit 1.
   
 0.961
rptor
Regulatory associated protein of MTOR complex 1.
    
 0.959
mlst8
MTOR associated protein, LST8 homolog.
    
 0.931
LOC115004002
Intersectin-2-like.
    
 0.919
itsn2
Intersectin 2.
    
 0.919
LOC115007168
TBC1 domain family member 7-like.
     
 0.909
akt1s1
AKT1 substrate 1.
    
 0.900
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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