Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115007067C-C motif chemokine 25-like. (156 aa)    
Predicted Functional Partners:
LOC115025496
C-C chemokine receptor type 9-like.
   
 0.999
LOC115022698
Atypical chemokine receptor 4-like.
    
 0.992
ackr4
Atypical chemokine receptor 4.
    
 0.992
ENSCGOP00000026483
Chemokine (C-C motif) receptor 7.
   
 0.975
LOC115014055
Stromal cell-derived factor 1-like.
    
 0.961
LOC115019976
Stromal cell-derived factor 1-like.
    
 0.961
LOC115022903
C-C motif chemokine 20-like.
     
 
0.915
LOC115023813
Interleukin-8-like.
    
 0.891
LOC115015938
Permeability factor 2-like.
    
 0.879
ENSCGOP00000056866
annotation not available
    
 0.847
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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