Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
grhl1Grainyhead like transcription factor 1. (613 aa)    
Predicted Functional Partners:
LOC115011890
Homeobox protein Hox-B6a-like.
    
 
 0.692
LOC115025067
Homeobox protein Hox-B6b.
    
 
 0.692
taf2
TATA-box binding protein associated factor 2.
    
   0.668
rnf2
Ring finger protein 2.
    
 
 0.656
RING1
Ring finger protein 1.
    
 
 0.656
trip13
Thyroid hormone receptor interactor 13.
   
   0.637
eea1
Early endosome antigen 1.
   
   0.516
lmo4
LIM domain only 4.
    
   0.509
LOC115014135
LIM domain transcription factor LMO4-B-like.
    
   0.509
LOC115016327
LIM domain transcription factor LMO4.1-like.
    
   0.509
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.