STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000008695Zgc:171929. (196 aa)    
Predicted Functional Partners:
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
    0.571
ubr3
Ubiquitin protein ligase E3 component n-recognin 3.
    
 
 0.559
sdhaf1
Succinate dehydrogenase complex assembly factor 1.
      
 0.538
snx5
Sorting nexin 5.
      
 0.514
mrpl24
Mitochondrial ribosomal protein L24.
      
 0.513
LOC115024640
Inhibitor of nuclear factor kappa-B kinase subunit alpha-like.
     
 0.497
LOC115019295
Barrier-to-autointegration factor.
      
 0.429
LOC115019294
Barrier-to-autointegration factor-like.
      
 0.429
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.