Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115018965Dachshund homolog 2-like. (564 aa)    
Predicted Functional Partners:
eya1
EYA transcriptional coactivator and phosphatase 1.
    
 
 0.702
eya2
EYA transcriptional coactivator and phosphatase 2.
    
 
 0.702
LOC115015377
Eyes absent homolog 3-like.
    
 
 0.702
eya4
EYA transcriptional coactivator and phosphatase 4.
    
 
 0.702
tm7sf3
Transmembrane 7 superfamily member 3.
      
 0.591
rnf14
Ring finger protein 14.
    
   0.513
LOC115007435
Transcription factor AP-1-like.
    
   0.510
LOC115016821
Transcription factor AP-1-like.
    
   0.510
LOC115011189
Putative testis-specific Y-encoded-like protein 3.
    
   0.509
ENSCGOP00000012346
annotation not available
    
   0.509
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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