Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115006183A-kinase anchor protein 8-like. (707 aa)    
Predicted Functional Partners:
xpnpep3
X-prolyl aminopeptidase 3.
      
 0.726
LOC115007842
Protein polybromo-1-like.
      
 0.725
taf1
TATA-box binding protein associated factor 1.
    
 
 0.708
dus3l
Dihydrouridine synthase 3 like.
      
 0.672
mrgbp
MRG domain binding protein.
      
 0.647
LOC115015423
Histone-lysine N-methyltransferase ASH1L-like.
    
 0.640
strada
STE20 related adaptor alpha.
    
 0.620
STRADB
STE20-related kinase adapter protein beta-like.
    
 0.620
LOC115022413
Serine/threonine-protein kinase OSR1.
    
 0.620
stk39
Serine/threonine kinase 39.
    
 0.620
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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