Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
mex3aMex-3 RNA binding family member A. (524 aa)    
Predicted Functional Partners:
cnot1
CCR4-NOT transcription complex subunit 1.
    
 
 0.804
LOC115021084
Aryl hydrocarbon receptor nuclear translocator-like.
      
 0.788
LOC115010323
Olfactomedin-like.
    
 
 0.756
PRRC2B
Proline rich coiled-coil 2B.
    
 
 0.704
LOC115015446
Protein PRRC2A-like.
    
 
 0.695
arnt2
Aryl hydrocarbon receptor nuclear translocator 2.
      
 0.661
vax2
Ventral anterior homeobox 2.
      
 0.650
hspb8
Heat shock protein family B (small) member 8.
      
 0.643
edc4
Enhancer of mRNA decapping 4.
      
 0.640
nudcd1
NudC domain containing 1.
    
   0.578
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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