Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
esyt2Extended synaptotagmin 2. (899 aa)    
Predicted Functional Partners:
faf2
Fas associated factor family member 2.
    
   0.618
reep5
Receptor accessory protein 5.
   
 
 0.592
exoc1
Exocyst complex component 1.
   
   0.581
LOC115016484
Rho-related GTP-binding protein RhoF-like.
    
  0.578
derl1
Derlin 1.
    
   0.577
LOC115018858
Rho-related GTP-binding protein RhoG-like.
    
  0.567
LOC115014347
Rho-related GTP-binding protein RhoG-like.
    
  0.567
LOC115008769
PRA1 family protein 3-like.
    
 
 0.544
arl6ip5
ADP ribosylation factor like GTPase 6 interacting protein 5.
    
 
 0.544
exoc2
Exocyst complex component 2.
    
   0.535
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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