Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ipo4Importin 4. (1093 aa)    
Predicted Functional Partners:
ipo5
Importin 5.
   
 
 0.975
ENSCGOP00000023250
annotation not available
   
   0.937
LOC115006432
Histone chaperone asf1b-B-like.
   
 
 0.934
LOC115011705
Histone chaperone asf1b-B.
   
 
 0.934
rrp12
Ribosomal RNA processing 12 homolog.
   
 
 0.932
xpo5
Exportin 5.
   
 
 0.931
NUP54
Nucleoporin 54.
   
 
 0.922
hat1
Histone acetyltransferase 1.
   
 
 0.920
TNPO2
Transportin-2.
   
 
 0.914
LOC115012095
Transportin-2-like.
   
 
 0.914
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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