Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
erich1Glutamate rich 1. (334 aa)    
Predicted Functional Partners:
pagr1
PAXIP1 associated glutamate rich protein 1.
      
 0.655
ENSCGOP00000000326
annotation not available
      
 0.584
ENSCGOP00000031550
Transmembrane protein 131.
      
 0.584
pcif1
PDX1 C-terminal inhibiting factor 1.
      
 0.533
pxdc1
PX domain containing 1.
      
 0.529
nudcd1
NudC domain containing 1.
      
 0.528
paxip1
PAX interacting protein 1.
      
 0.508
slc15a5
Solute carrier family 15 member 5.
      
 0.507
kcnk9
Potassium two pore domain channel subfamily K member 9.
      
 0.498
synrg
Synergin gamma.
      
 0.475
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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