Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
meis2Meis homeobox 2. (470 aa)    
Predicted Functional Partners:
LOC115015574
Homeobox protein Hox-A9.
    
 
 0.918
fam222a
Family with sequence similarity 222 member A.
    
   0.844
dlx3
Distal-less homeobox 3.
    
 
 0.831
tshz3
Teashirt zinc finger homeobox 3.
   
 0.809
LOC115010129
Teashirt homolog 3-like.
   
 0.809
LOC115017998
Homeobox protein meis3-B-like.
   
  0.804
LOC115009398
pre-B-cell leukemia transcription factor 1-like.
   
 0.802
pbx1
PBX homeobox 1.
   
 0.802
LOC115021984
pre-B-cell leukemia transcription factor 1.
   
 0.802
pbx3
PBX homeobox 3.
   
 0.802
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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