Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cebpdCCAAT enhancer binding protein delta. (292 aa)    
Predicted Functional Partners:
LOC115013576
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.826
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.826
atf4
Activating transcription factor 4.
   
 0.798
LOC115004834
Cytochrome c oxidase subunit 5A, mitochondrial-like.
   
 0.796
LOC115009131
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.796
PPARA
Peroxisome proliferator-activated receptor alpha-like.
    
 0.793
hdac3
Histone deacetylase 3.
    
 0.787
c24h1orf198
Chromosome 24 C1orf198 homolog.
   
 0.784
LOC115016619
Cytochrome c oxidase subunit 5B, mitochondrial-like.
   
 0.784
LOC115018756
Interferon regulatory factor 1-like.
    
 
 0.779
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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