Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115027746Leucine-rich repeat and fibronectin type-III domain-containing protein 2-like. (788 aa)    
Predicted Functional Partners:
dlg3
Discs large MAGUK scaffold protein 3.
    
 0.782
LOC115005255
Disks large homolog 4-like.
    
 0.782
LOC115019481
Disks large homolog 2-like.
    
 0.782
LOC115006765
Discs large homolog 1-like protein.
    
 0.782
LOC115022782
Discs large homolog 1-like protein.
    
 0.782
ENSCGOP00000047185
annotation not available
    
 0.782
LOC115018622
Disks large homolog 4-like.
    
 0.782
ENSCGOP00000009421
annotation not available
   
 0.713
grin1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.713
LOC115011327
Platelet glycoprotein IX-like.
   
 0.655
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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