Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tsfmTs translation elongation factor, mitochondrial. (309 aa)    
Predicted Functional Partners:
tufm
Tu translation elongation factor, mitochondrial.
  
 0.999
mrrf
Mitochondrial ribosome recycling factor.
  
 
 0.994
mrps16
Mitochondrial ribosomal protein S16.
  
 0.988
mrpl19
Mitochondrial ribosomal protein L19.
  
 0.987
pdcd11
Programmed cell death 11.
  
 
 0.983
mrps9
Mitochondrial ribosomal protein S9.
  
 0.979
mrpl20
Mitochondrial ribosomal protein L20.
  
 0.974
mrpl17
Mitochondrial ribosomal protein L17.
  
 0.974
mrpl9
Mitochondrial ribosomal protein L9.
  
 0.973
LOC115021222
28S ribosomal protein S12, mitochondrial-like.
  
 0.973
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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