Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115027635ena/VASP-like protein. (401 aa)    
Predicted Functional Partners:
LOC115021315
Zyxin-like.
   
 0.859
LOC115023888
Thyroid receptor-interacting protein 6-like.
    
 0.765
LOC115006825
Lipoma-preferred partner homolog.
    
 0.765
fblim1
Filamin binding LIM protein 1.
    
 0.735
tes
Testin LIM domain protein.
    
 0.701
abl2
ABL proto-oncogene 2, non-receptor tyrosine kinase.
    
 
 0.686
abl1
ABL proto-oncogene 1, non-receptor tyrosine kinase.
    
 
 0.686
pfn2
Profilin 2.
   
 0.679
LOC115004494
Profilin-3-like.
   
 0.679
LOC115022018
Ras-associated and pleckstrin homology domains-containing protein 1-like.
    
 
 0.636
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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