Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxw8F-box and WD repeat domain containing 8. (608 aa)    
Predicted Functional Partners:
rbx1
Ring-box 1.
    
 0.999
skp1
S-phase kinase associated protein 1.
    
 0.997
LOC115018021
Cullin-3.
    
 0.893
CUL3
Cullin-3-like.
    
 0.893
fbxo4
F-box protein 4.
    
 0.841
fbxl12
F-box and leucine rich repeat protein 12.
    
 0.808
LOC115014396
F-box/WD repeat-containing protein 11-like.
   
 0.787
coq9
Coenzyme Q9.
    
 0.767
rnf7
Ring finger protein 7.
    
 0.744
skp2
S-phase kinase associated protein 2.
    
 0.732
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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