Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115019272Kin of IRRE-like protein 3. (720 aa)    
Predicted Functional Partners:
nphs1
NPHS1 adhesion molecule, nephrin.
   
 0.933
nck2
NCK adaptor protein 2.
    
 0.665
nck1
NCK adaptor protein 1.
    
 0.665
LOC115006417
Tight junction protein ZO-1-like.
    
 
 0.621
LOC115009291
Tight junction protein ZO-1-like.
    
 
 0.621
LOC115015397
Proto-oncogene tyrosine-protein kinase Yrk-like.
    
  0.501
fyn
FYN proto-oncogene, Src family tyrosine kinase.
    
  0.501
ENSCGOP00000049235
Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites.
    
  0.501
LOC115004532
Protein-tyrosine kinase 6-like.
    
  0.501
LOC115027270
Tyrosine-protein kinase fyna-like.
    
  0.501
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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