Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115027018Dynactin subunit 1-like. (1271 aa)    
Predicted Functional Partners:
dctn2
Dynactin subunit 2.
   
 0.999
dctn3
Dynactin subunit 3.
   
 0.998
dctn5
Dynactin subunit 5.
    
 0.997
DCTN6
Dynactin subunit 6.
    
 0.997
dctn4
Dynactin subunit 4.
    
 0.997
ACTR1B
Beta-centractin.
   
 0.997
actr10
Actin related protein 10.
    
 0.997
LOC115015366
Cytoplasmic dynein 1 light intermediate chain 1-like.
   
 0.944
dync1li2
Dynein cytoplasmic 1 light intermediate chain 2.
   
 0.944
mapre1
Microtubule associated protein RP/EB family member 1.
    
 0.935
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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