Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc39a8Solute carrier family 39 member 8. (458 aa)    
Predicted Functional Partners:
LOC115013884
Zinc transporter ZIP14-like.
  
  
 
0.903
slc30a1
Solute carrier family 30 member 1.
   
 0.833
slc30a4
Solute carrier family 30 member 4.
   
 0.814
slc39a9
Solute carrier family 39 member 9.
    
 
 0.770
slc30a5
Solute carrier family 30 member 5.
  
 0.769
LOC115028906
Zinc transporter 2-like.
    
 
 0.761
s100z
S100 calcium binding protein Z.
    
 
 0.702
LOC115028852
E3 ubiquitin-protein ligase RNF128-like.
      
 0.693
SLC39A1
Solute carrier family 39 member 1.
   
 0.692
slc30a9
Solute carrier family 30 member 9.
     
 0.636
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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