Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tpp1Tripeptidyl peptidase 1. (565 aa)    
Predicted Functional Partners:
pot1
Protection of telomeres 1.
    
 0.972
ppt1
Palmitoyl-protein thioesterase 1.
   
 
 0.871
cln3
CLN3 lysosomal/endosomal transmembrane protein, battenin.
      
 0.846
tert
Telomerase reverse transcriptase.
   
 
 0.836
cln6
CLN6 transmembrane ER protein.
    
 0.825
cln5
CLN5 intracellular trafficking protein.
      
 0.823
tinf2
TERF1 interacting nuclear factor 2.
    
 0.795
stn1
STN1 subunit of CST complex.
    
 
 0.773
cln8
CLN8 transmembrane ER and ERGIC protein.
    
 
 0.756
mfsd8
Major facilitator superfamily domain containing 8.
    
 
 0.706
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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