Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tmem256Transmembrane protein 256. (114 aa)    
Predicted Functional Partners:
zc2hc1a
Zinc finger C2HC-type containing 1A.
      
 0.752
tmem160
Transmembrane protein 160.
   
  
 0.621
nfu1
NFU1 iron-sulfur cluster scaffold.
      
 0.585
mrm2
Mitochondrial rRNA methyltransferase 2.
      
 0.573
SDHB
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial.
  
    0.551
LOC115010395
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like.
  
    0.551
ENSCGOP00000000951
annotation not available
      
 0.523
lyrm9
LYR motif containing 9.
      
 0.512
romo1
Reactive oxygen species modulator 1.
   
  
 0.475
mecr
Mitochondrial trans-2-enoyl-CoA reductase.
  
    0.473
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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