Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mylipMyosin regulatory light chain interacting protein. (480 aa)    
Predicted Functional Partners:
cnpy2
Canopy FGF signaling regulator 2.
    
 
 0.924
vldlr
Very low density lipoprotein receptor.
    
 0.895
ldlr
Low density lipoprotein receptor.
    
 0.895
LOC115022738
Low-density lipoprotein receptor-related protein 8-like.
    
 0.895
LOC115007267
Low-density lipoprotein receptor-related protein 8-like.
    
 0.895
LOC115011422
Low-density lipoprotein receptor-like.
    
 0.895
apaf1
Apoptotic peptidase activating factor 1.
   
 0.848
incenp
Inner centromere protein.
   
 0.821
ctr9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
   0.816
paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
   0.813
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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