Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115012814TBC1 domain family member 16-like. (722 aa)    
Predicted Functional Partners:
dgke
Diacylglycerol kinase epsilon.
      
 0.846
LOC115017574
Ras-related protein Rab-4B.
    
 0.815
rab4a
RAB4A, member RAS oncogene family.
    
 0.815
pla2g6
Phospholipase A2 group VI.
      
 0.787
rab2a
RAB2A, member RAS oncogene family.
    
 0.780
tbc1d19
TBC1 domain family member 19.
      
 0.740
wdr5
WD repeat domain 5.
      
 0.728
cdc16
Cell division cycle 16.
      
 0.725
ENSCGOP00000011803
Caspase recruitment domain family, member 14.
      
 0.716
tbc1d1
TBC1 domain family member 1.
      
 0.713
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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