Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
zbtb12Zinc finger and BTB domain containing 12. (655 aa)    
Predicted Functional Partners:
skiv2l
Ski2 like RNA helicase.
    
 
 0.681
DDAH1
Dimethylarginine dimethylaminohydrolase 1.
     
 0.616
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.598
LOC115015466
Lysosomal thioesterase PPT2-A-like.
      
 0.574
mysm1
Myb like, SWIRM and MPN domains 1.
   
  0.568
kctd2
Potassium channel tetramerization domain containing 2.
    
 0.560
LOC115004020
Lymphokine-activated killer T-cell-originated protein kinase homolog.
    
  0.527
ENSCGOP00000011474
annotation not available
    
  0.527
gtf3c3
General transcription factor IIIC subunit 3.
   
 0.482
rrp12
Ribosomal RNA processing 12 homolog.
     
 0.476
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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