ENSCGOP00000010819 protein (Cottoperca gobio)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCGOP00000010819

annotation not available (195 aa)

Predicted Functional Partners:

trip12

0.958

LOC115021392

0.901

rps27a

0.841

ube2v2

0.830

rbx1

0.816

LOC115007954

0.812

uba1

0.812

uba6

0.812

rnf8

0.808

birc6

0.805

Your Current Organism:

Cottoperca gobio

NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCGOP00000010819	LOC115007954	ENSCGOP00000010819	ENSCGOP00000003956	annotation not available	Ubiquitin-like modifier-activating enzyme 1.	0.812
ENSCGOP00000010819	LOC115021392	ENSCGOP00000010819	ENSCGOP00000013311	annotation not available	Ubiquitin-conjugating enzyme E2 E2.	0.901
ENSCGOP00000010819	birc6	ENSCGOP00000010819	ENSCGOP00000008537	annotation not available	Baculoviral IAP repeat containing 6.	0.805
ENSCGOP00000010819	rbx1	ENSCGOP00000010819	ENSCGOP00000018163	annotation not available	Ring-box 1.	0.816
ENSCGOP00000010819	rnf8	ENSCGOP00000010819	ENSCGOP00000044734	annotation not available	Ring finger protein 8.	0.808
ENSCGOP00000010819	rps27a	ENSCGOP00000010819	ENSCGOP00000027903	annotation not available	Ribosomal protein S27a.	0.841
ENSCGOP00000010819	trip12	ENSCGOP00000010819	ENSCGOP00000042888	annotation not available	Thyroid hormone receptor interactor 12.	0.958
ENSCGOP00000010819	uba1	ENSCGOP00000010819	ENSCGOP00000017495	annotation not available	Ubiquitin like modifier activating enzyme 1.	0.812
ENSCGOP00000010819	uba6	ENSCGOP00000010819	ENSCGOP00000034360	annotation not available	Ubiquitin like modifier activating enzyme 6.	0.812
ENSCGOP00000010819	ube2v2	ENSCGOP00000010819	ENSCGOP00000007818	annotation not available	Ubiquitin conjugating enzyme E2 V2.	0.830
LOC115007954	ENSCGOP00000010819	ENSCGOP00000003956	ENSCGOP00000010819	Ubiquitin-like modifier-activating enzyme 1.	annotation not available	0.812
LOC115007954	LOC115021392	ENSCGOP00000003956	ENSCGOP00000013311	Ubiquitin-like modifier-activating enzyme 1.	Ubiquitin-conjugating enzyme E2 E2.	0.853
LOC115007954	birc6	ENSCGOP00000003956	ENSCGOP00000008537	Ubiquitin-like modifier-activating enzyme 1.	Baculoviral IAP repeat containing 6.	0.961
LOC115007954	rbx1	ENSCGOP00000003956	ENSCGOP00000018163	Ubiquitin-like modifier-activating enzyme 1.	Ring-box 1.	0.751
LOC115007954	rps27a	ENSCGOP00000003956	ENSCGOP00000027903	Ubiquitin-like modifier-activating enzyme 1.	Ribosomal protein S27a.	0.946
LOC115007954	trip12	ENSCGOP00000003956	ENSCGOP00000042888	Ubiquitin-like modifier-activating enzyme 1.	Thyroid hormone receptor interactor 12.	0.874
LOC115007954	uba1	ENSCGOP00000003956	ENSCGOP00000017495	Ubiquitin-like modifier-activating enzyme 1.	Ubiquitin like modifier activating enzyme 1.	0.902
LOC115007954	uba6	ENSCGOP00000003956	ENSCGOP00000034360	Ubiquitin-like modifier-activating enzyme 1.	Ubiquitin like modifier activating enzyme 6.	0.915
LOC115007954	ube2v2	ENSCGOP00000003956	ENSCGOP00000007818	Ubiquitin-like modifier-activating enzyme 1.	Ubiquitin conjugating enzyme E2 V2.	0.800
LOC115021392	ENSCGOP00000010819	ENSCGOP00000013311	ENSCGOP00000010819	Ubiquitin-conjugating enzyme E2 E2.	annotation not available	0.901