Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adat1Adenosine deaminase tRNA specific 1. (513 aa)    
Predicted Functional Partners:
ENSCGOP00000049110
Adenosine deaminase tRNA specific 3.
      
 0.855
kars1
lysyl-tRNA synthetase 1.
      
 0.767
ENSCGOP00000055285
annotation not available
      
 0.689
ENSCGOP00000031284
annotation not available
   
  
 0.685
trub1
TruB pseudouridine synthase family member 1.
   
  
 0.667
slc30a9
Solute carrier family 30 member 9.
      
 0.645
aars1
alanyl-tRNA synthetase 1.
      
 0.583
ENSCGOP00000028188
annotation not available
   
 0.577
ENSCGOP00000028190
annotation not available
   
 0.577
ENSCGOP00000028197
annotation not available
   
 0.577
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.