Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
tecpr1Tectonin beta-propeller repeat containing 1. (1058 aa)    
Predicted Functional Partners:
pdpk1
3-phosphoinositide dependent protein kinase 1.
    
 0.770
LOC115005141
Protein phosphatase 1 regulatory subunit 14A-like.
    
  0.490
CASK
Peripheral plasma membrane protein CASK-like.
    
  0.490
LOC115019387
Protein phosphatase 1 regulatory subunit 14A-like.
    
  0.490
CASK-2
Calcium/calmodulin dependent serine protein kinase.
    
  0.490
nos1
Nitric oxide synthase 1.
    
  0.486
LOC115018075
NADPH--cytochrome P450 reductase.
    
  0.486
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
    
  0.486
srd5a3
Steroid 5 alpha-reductase 3.
   
    0.476
ermn
Ermin.
    
 0.464
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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