Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
nkiras1NFKB inhibitor interacting Ras like 1. (192 aa)    
Predicted Functional Partners:
LOC115011095
dnaJ homolog subfamily C member 11-like.
    
   0.832
ENSCGOP00000042979
annotation not available
    
   0.792
ralgapb
Ral GTPase activating protein non-catalytic beta subunit.
    
   0.792
ralgapa2
Ral GTPase activating protein catalytic alpha subunit 2.
    
 
 0.790
ralgapa1
Ral GTPase activating protein catalytic alpha subunit 1.
    
 
 0.790
LOC115008855
dnaJ homolog subfamily C member 11-like.
    
   0.687
gfod2
Glucose-fructose oxidoreductase domain containing 2.
    
   0.686
LOC115025293
Glucose-fructose oxidoreductase domain-containing protein 1.
    
   0.686
ttc7b
Tetratricopeptide repeat domain 7B.
      
 0.582
LOC115014002
PDZ and LIM domain protein 2-like.
      
 0.562
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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