ENSCGOP00000011003 protein (Cottoperca gobio)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSCGOP00000011003

annotation not available (640 aa)

Predicted Functional Partners:

LOC115012755

0.725

ube2i

0.725

msantd4

0.615

sumo1

0.589

kctd2

0.492

lrrc20

0.486

arfgap3

0.449

ENSCGOP00000004739

0.422

ENSCGOP00000005117

0.422

ENSCGOP00000005404

0.422

Your Current Organism:

Cottoperca gobio

NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCGOP00000004739	ENSCGOP00000011003	ENSCGOP00000004739	ENSCGOP00000011003	annotation not available	annotation not available	0.422
ENSCGOP00000004739	sumo1	ENSCGOP00000004739	ENSCGOP00000018002	annotation not available	Small ubiquitin like modifier 1.	0.514
ENSCGOP00000005117	ENSCGOP00000011003	ENSCGOP00000005117	ENSCGOP00000011003	annotation not available	annotation not available	0.422
ENSCGOP00000005117	sumo1	ENSCGOP00000005117	ENSCGOP00000018002	annotation not available	Small ubiquitin like modifier 1.	0.514
ENSCGOP00000005404	ENSCGOP00000011003	ENSCGOP00000005404	ENSCGOP00000011003	annotation not available	annotation not available	0.422
ENSCGOP00000005404	sumo1	ENSCGOP00000005404	ENSCGOP00000018002	annotation not available	Small ubiquitin like modifier 1.	0.514
ENSCGOP00000011003	ENSCGOP00000004739	ENSCGOP00000011003	ENSCGOP00000004739	annotation not available	annotation not available	0.422
ENSCGOP00000011003	ENSCGOP00000005117	ENSCGOP00000011003	ENSCGOP00000005117	annotation not available	annotation not available	0.422
ENSCGOP00000011003	ENSCGOP00000005404	ENSCGOP00000011003	ENSCGOP00000005404	annotation not available	annotation not available	0.422
ENSCGOP00000011003	LOC115012755	ENSCGOP00000011003	ENSCGOP00000003503	annotation not available	SUMO-conjugating enzyme UBC9-like.	0.725
ENSCGOP00000011003	arfgap3	ENSCGOP00000011003	ENSCGOP00000042820	annotation not available	ADP ribosylation factor GTPase activating protein 3.	0.449
ENSCGOP00000011003	kctd2	ENSCGOP00000011003	ENSCGOP00000041650	annotation not available	Potassium channel tetramerization domain containing 2.	0.492
ENSCGOP00000011003	lrrc20	ENSCGOP00000011003	ENSCGOP00000047556	annotation not available	Leucine rich repeat containing 20.	0.486
ENSCGOP00000011003	msantd4	ENSCGOP00000011003	ENSCGOP00000040353	annotation not available	Myb/SANT DNA binding domain containing 4 with coiled-coils.	0.615
ENSCGOP00000011003	sumo1	ENSCGOP00000011003	ENSCGOP00000018002	annotation not available	Small ubiquitin like modifier 1.	0.589
ENSCGOP00000011003	ube2i	ENSCGOP00000011003	ENSCGOP00000012839	annotation not available	Ubiquitin conjugating enzyme E2 I.	0.725
LOC115012755	ENSCGOP00000011003	ENSCGOP00000003503	ENSCGOP00000011003	SUMO-conjugating enzyme UBC9-like.	annotation not available	0.725
LOC115012755	arfgap3	ENSCGOP00000003503	ENSCGOP00000042820	SUMO-conjugating enzyme UBC9-like.	ADP ribosylation factor GTPase activating protein 3.	0.488
LOC115012755	sumo1	ENSCGOP00000003503	ENSCGOP00000018002	SUMO-conjugating enzyme UBC9-like.	Small ubiquitin like modifier 1.	0.993
arfgap3	ENSCGOP00000011003	ENSCGOP00000042820	ENSCGOP00000011003	ADP ribosylation factor GTPase activating protein 3.	annotation not available	0.449