Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000011364Zgc:113436. (433 aa)    
Predicted Functional Partners:
efcab2
EF-hand calcium binding domain 2.
    
 
 0.852
rps14
Ribosomal protein S14.
    
  0.841
cd74
CD74 molecule.
    
  0.841
pgbd5
piggyBac transposable element derived 5.
    
 
 0.783
fancm
FA complementation group M.
    
 0.721
rps5
Ribosomal protein S5.
   
   0.717
lin52
Lin-52 DREAM MuvB core complex component.
    
 0.698
rag1
Recombination activating 1.
      
 0.692
lin54
Lin-54 DREAM MuvB core complex component.
    
 0.690
cnbp
CCHC-type zinc finger nucleic acid binding protein.
    
 
 0.675
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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