Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000011441annotation not available (109 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
    
 0.958
birc6
Baculoviral IAP repeat containing 6.
   
 0.805
pex12
Peroxisomal biogenesis factor 12.
    
 0.797
rps27a
Ribosomal protein S27a.
   
 0.783
zfand4
Zinc finger AN1-type containing 4.
   
 0.778
ENSCGOP00000002804
annotation not available
   
 0.761
ube2v2
Ubiquitin conjugating enzyme E2 V2.
   
 0.761
skp1
S-phase kinase associated protein 1.
   
 0.751
pcna
Proliferating cell nuclear antigen.
   
 0.745
rbx1
Ring-box 1.
    
 0.741
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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