Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115017836Solute carrier family 12 member 9-like. (959 aa)    
Predicted Functional Partners:
srrt
Serrate, RNA effector molecule.
      
 0.579
ENSCGOP00000027627
annotation not available
   
 0.559
LOC115014216
Uncharacterized LOC115014216.
   
 0.559
pask
PAS domain containing serine/threonine kinase.
    
 0.558
tm7sf3
Transmembrane 7 superfamily member 3.
     
 0.479
serpine1
Serpin family E member 1.
   
  
 0.461
gigyf1
GRB10 interacting GYF protein 1.
      
 0.457
ENSCGOP00000009827
annotation not available
      
 0.457
sod2
Superoxide dismutase 2.
   
 0.441
kiaa0513
KIAA0513 ortholog.
   
 0.400
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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