Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
LOC115013625Multidrug and toxin extrusion protein 1-like. (587 aa)    
Predicted Functional Partners:
hsd17b10
Hydroxysteroid 17-beta dehydrogenase 10.
    
 0.782
fdft1
Farnesyl-diphosphate farnesyltransferase 1.
   
  
 0.737
LOC115023601
tRNA methyltransferase 10 homolog C-like.
   
 0.664
trmt10a
tRNA methyltransferase 10A.
   
 0.664
tbp
TATA-box binding protein.
   
    0.617
tbpl2
TATA-box binding protein like 2.
   
    0.617
tbpl1
TATA-box binding protein like 1.
   
    0.617
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
  
  
 0.594
LOC115015592
Glyceraldehyde-3-phosphate dehydrogenase-like.
  
  
 0.594
CCNE2
G1/S-specific cyclin-E2-like.
   
 
  0.588
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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