Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
gabrdGamma-aminobutyric acid type A receptor delta subunit. (460 aa)    
Predicted Functional Partners:
LOC115014530
Gamma-aminobutyric acid receptor subunit alpha-4-like.
   
 0.882
LOC115019114
Gamma-aminobutyric acid receptor subunit alpha-6-like.
   
 0.882
LOC115027386
Gamma-aminobutyric acid receptor subunit alpha-2-like.
   
 0.708
LOC115014656
Gamma-aminobutyric acid receptor subunit alpha-2-like.
   
 0.708
efhc1
EF-hand domain containing 1.
      
 0.687
gabra5
Gamma-aminobutyric acid type A receptor alpha5 subunit.
   
 0.670
LOC115021438
Gamma-aminobutyric acid receptor subunit alpha-5-like.
   
 0.670
LOC115018763
Gamma-aminobutyric acid receptor subunit alpha-3-like.
   
 0.670
LOC115019115
Gamma-aminobutyric acid receptor subunit alpha-1-like.
   
 0.670
LOC115023473
DNA-directed RNA polymerase II subunit RPB1-like.
    
 
 0.608
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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