Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rab35RAB35, member RAS oncogene family. (201 aa)    
Predicted Functional Partners:
ift52
Intraflagellar transport 52.
    
 0.951
ift88
Intraflagellar transport 88.
    
 0.951
ift22
Intraflagellar transport 22.
    
 0.950
ift81
Intraflagellar transport 81.
    
 0.945
LOC115017794
Intraflagellar transport protein 80 homolog.
    
 0.944
LOC115016650
DENN domain-containing protein 1A-like.
    
 0.943
ift57
Intraflagellar transport 57.
    
 0.935
cluap1
Clusterin associated protein 1.
    
 0.933
hspb11
Heat shock protein family B (small) member 11.
    
 0.931
ift46
Intraflagellar transport 46.
    
 0.931
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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