Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
bicdl1BICD family like cargo adaptor 1. (531 aa)    
Predicted Functional Partners:
ACTR1B
Beta-centractin.
    
 
 0.817
ccdc96
Coiled-coil domain containing 96.
    
 0.735
coq5
Coenzyme Q5, methyltransferase.
      
 0.726
rnf10
Ring finger protein 10.
      
 0.723
HOOK3
Hook microtubule tethering protein 3.
    
 
 0.716
ccdc125
Coiled-coil domain containing 125.
      
 0.691
ENSCGOP00000036082
annotation not available
    
 
 0.675
ccdc92
Coiled-coil domain containing 92.
      
 0.647
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
   
 0.644
draxin
Dorsal inhibitory axon guidance protein.
      
 0.640
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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