Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxo22F-box protein 22. (390 aa)    
Predicted Functional Partners:
skp1
S-phase kinase associated protein 1.
    
 0.993
rbx1
Ring-box 1.
    
 0.951
nfkbia
NFKB inhibitor alpha.
     
  0.908
LOC115003431
NF-kappa-B inhibitor alpha-like.
     
  0.908
LOC115018021
Cullin-3.
    
 0.838
CUL3
Cullin-3-like.
    
 0.838
nsd2
Nuclear receptor binding SET domain protein 2.
    
   0.760
rnf7
Ring finger protein 7.
    
  0.758
cacul1
CDK2 associated cullin domain 1.
    
 0.756
LOC115027780
Transcription regulator protein BACH2-like.
    
 
 0.740
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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