Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cd164CD164 molecule. (184 aa)    
Predicted Functional Partners:
ppil1
Peptidylprolyl isomerase like 1.
   
 0.803
bud31
BUD31 homolog.
   
 0.798
pin1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
  
 0.792
snw1
SNW domain containing 1.
    
 0.782
LOC115014475
pre-mRNA-processing factor 19-like.
   
 0.763
crnkl1
Crooked neck pre-mRNA splicing factor 1.
   
 0.760
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
  
 0.758
syf2
SYF2 pre-mRNA splicing factor.
    
 0.735
nup155
Nucleoporin 155.
    
 0.732
nup88
Nucleoporin 88.
    
 0.728
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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